# -----------------
# LOCALIZER 1.0 Predictions (-e mode) 
# -----------------
Identifier                                                                                       	Chloroplast       	Mitochondria      	Nucleus
jgi|Treme1|37462|estExt_Genewise1.C_13027 | Effector probability: 0.989                          	-                 	-                 	-      
jgi|Treme1|63211|fgeneshTM_pg.7_#_244 | Effector probability: 0.529                              	-                 	Y (0.862 | 63-99) 	Y (RRRR,KRRDMYLPRRERELRSRER,PRRERELRSRERARARRRERRRTMR)
jgi|Treme1|59215|fgeneshTM_pg.1_#_1205 | Effector probability: 0.996                             	-                 	-                 	-      
jgi|Treme1|44940|estExt_Genewise1Plus.C_90226 | Effector probability: 0.53                       	-                 	-                 	-      
jgi|Treme1|59216|fgeneshTM_pg.1_#_1206 | Effector probability: 0.826                             	-                 	-                 	-      
jgi|Treme1|60552|fgeneshTM_pg.2_#_665 | Effector probability: 0.573                              	Y (0.995 | 35-86) 	-                 	Y (RKSK,KKREKRKS)
jgi|Treme1|27865|e_gw1.2.663.1 | Effector probability: 0.681                                     	-                 	-                 	-      
jgi|Treme1|70687|estExt_fgeneshTM_pm.C_10209 | Effector probability: 0.547                       	-                 	-                 	Y (RRRR)
jgi|Treme1|60349|fgeneshTM_pg.2_#_462 | Effector probability: 0.611                              	-                 	-                 	Y (GKIRKSRKGWKR)
jgi|Treme1|57085|fgeneshTM_kg.6_#_59_#_436_1_CCOI_CCON | Effector probability: 0.916             	-                 	-                 	-      
jgi|Treme1|60728|fgeneshTM_pg.2_#_841 | Effector probability: 1.0                                	-                 	-                 	-      
jgi|Treme1|73346|estExt_fgeneshTM_pg.C_20596 | Effector probability: 0.856                       	Y (0.955 | 60-80) 	-                 	Y (RRMGQRRTNKAEQLKKKDY)
jgi|Treme1|59268|fgeneshTM_pg.1_#_1258 | Effector probability: 0.999                             	-                 	-                 	-      
jgi|Treme1|65082|fgeneshTM_pg.13_#_59 | Effector probability: 0.944                              	-                 	-                 	Y (PKPS)
jgi|Treme1|43415|estExt_Genewise1Plus.C_30841 | Effector probability: 0.751                      	-                 	Y (0.969 | 58-96) 	-      
jgi|Treme1|63880|fgeneshTM_pg.9_#_199 | Effector probability: 0.937                              	-                 	-                 	Y (RKSVIDAMRREALGLRRRQ)
jgi|Treme1|45819|estExt_Genewise1Plus.C_150191 | Effector probability: 0.974                     	-                 	-                 	-      
jgi|Treme1|62443|fgeneshTM_pg.5_#_358 | Effector probability: 0.817                              	-                 	-                 	-      
jgi|Treme1|71861|estExt_fgeneshTM_pm.C_70070 | Effector probability: 0.927                       	-                 	-                 	-      
jgi|Treme1|65953|fgeneshTM_pg.17_#_102 | Effector probability: 0.892                             	-                 	-                 	-      
jgi|Treme1|35791|e_gw1.19.213.1 | Effector probability: 0.968                                    	-                 	-                 	-      
jgi|Treme1|66240|fgeneshTM_pg.19_#_140 | Effector probability: 0.56                              	-                 	-                 	-      
jgi|Treme1|64244|fgeneshTM_pg.10_#_194 | Effector probability: 0.881                             	-                 	-                 	-      
jgi|Treme1|63250|fgeneshTM_pg.7_#_283 | Effector probability: 0.862                              	-                 	-                 	-      
jgi|Treme1|66472|fgeneshTM_pg.23_#_38 | Effector probability: 0.877                              	-                 	-                 	-      
jgi|Treme1|36488|estExt_Genewise1.C_10527 | Effector probability: 0.998                          	-                 	-                 	-      
jgi|Treme1|59217|fgeneshTM_pg.1_#_1207 | Effector probability: 0.806                             	-                 	-                 	-      
jgi|Treme1|59218|fgeneshTM_pg.1_#_1208 | Effector probability: 1.0                               	-                 	-                 	-      
jgi|Treme1|43811|estExt_Genewise1Plus.C_40777 | Effector probability: 0.803                      	Y (0.89 | 23-62)  	-                 	-      
jgi|Treme1|57036|fgeneshTM_kg.6_#_10_#_2112_0_CCOI5422.g1_CCOI_CCON | Effector probability: 0.892	-                 	-                 	-      
jgi|Treme1|64245|fgeneshTM_pg.10_#_195 | Effector probability: 0.944                             	-                 	-                 	Y (KRAR)
jgi|Treme1|64145|fgeneshTM_pg.10_#_95 | Effector probability: 0.804                              	Y (0.997 | 73-93) 	-                 	-      
jgi|Treme1|57084|fgeneshTM_kg.6_#_58_#_6_1_CCOI_CCON | Effector probability: 0.537               	-                 	-                 	-      
jgi|Treme1|70561|fgeneshTM_pm.25_#_23 | Effector probability: 1.0                                	-                 	-                 	-      
jgi|Treme1|64491|fgeneshTM_pg.11_#_99 | Effector probability: 0.69                               	-                 	Y (0.999 | 29-49) 	Y (RRRR)
jgi|Treme1|63889|fgeneshTM_pg.9_#_208 | Effector probability: 0.898                              	Y (0.97 | 76-109) 	-                 	-      
jgi|Treme1|29871|e_gw1.4.758.1 | Effector probability: 1.0                                       	Y (1.0 | 56-84)   	-                 	-      
jgi|Treme1|57956|fgeneshTM_kg.20_#_1_#_2110_1_CCOI_CCON | Effector probability: 0.929            	Y (0.967 | 50-89) 	-                 	-      
jgi|Treme1|59431|fgeneshTM_pg.1_#_1421 | Effector probability: 0.956                             	Y (0.999 | 55-81) 	-                 	-      
jgi|Treme1|69876|fgeneshTM_pm.12_#_10 | Effector probability: 0.995                              	-                 	-                 	-      
jgi|Treme1|64639|fgeneshTM_pg.11_#_247 | Effector probability: 0.959                             	-                 	-                 	-      
jgi|Treme1|61443|fgeneshTM_pg.3_#_636 | Effector probability: 0.793                              	-                 	-                 	-      
jgi|Treme1|60990|fgeneshTM_pg.3_#_183 | Effector probability: 0.763                              	-                 	-                 	-      
jgi|Treme1|55968|fgeneshTM_kg.1_#_202_#_276_0_CCOI6062.g1_CCOI_CCON | Effector probability: 0.659	Y (0.986 | 51-77) 	Y (0.99 | 50-80)  	Y (KIMRSPLLRKAQVKGKQGIKRQVRRRK)
jgi|Treme1|63441|fgeneshTM_pg.8_#_119 | Effector probability: 0.72                               	Y (0.964 | 68-101)	-                 	-      
jgi|Treme1|59214|fgeneshTM_pg.1_#_1204 | Effector probability: 0.971                             	-                 	-                 	-      
jgi|Treme1|58702|fgeneshTM_pg.1_#_692 | Effector probability: 0.899                              	Y (0.991 | 23-43) 	-                 	-      
jgi|Treme1|62552|fgeneshTM_pg.5_#_467 | Effector probability: 0.968                              	-                 	-                 	-      
jgi|Treme1|62538|fgeneshTM_pg.5_#_453 | Effector probability: 0.963                              	-                 	-                 	-      
jgi|Treme1|55839|fgeneshTM_kg.1_#_73_#_703_1_CCOI_CCON | Effector probability: 0.895             	-                 	-                 	-      
jgi|Treme1|60870|fgeneshTM_pg.3_#_63 | Effector probability: 0.925                               	Y (0.998 | 85-106)	-                 	-      
jgi|Treme1|25177|e_gw1.1.1373.1 | Effector probability: 0.74                                     	-                 	-                 	-      
jgi|Treme1|66239|fgeneshTM_pg.19_#_139 | Effector probability: 0.866                             	-                 	-                 	-      
jgi|Treme1|32155|e_gw1.8.257.1 | Effector probability: 0.652                                     	-                 	-                 	-      
jgi|Treme1|61846|fgeneshTM_pg.4_#_377 | Effector probability: 0.516                              	-                 	-                 	Y (RKHYLSVEKGIPKRKLN)
jgi|Treme1|71612|estExt_fgeneshTM_pm.C_50059 | Effector probability: 0.739                       	-                 	-                 	-      
jgi|Treme1|62444|fgeneshTM_pg.5_#_359 | Effector probability: 0.92                               	-                 	-                 	-      
jgi|Treme1|33345|e_gw1.10.339.1 | Effector probability: 0.978                                    	-                 	-                 	-      
jgi|Treme1|59007|fgeneshTM_pg.1_#_997 | Effector probability: 0.741                              	-                 	-                 	-      

#--------------------------------------
#--------------------------------------
# Proteins analyzed: 59 from file: ./PaperResults/Tremella_mesenterica_secretome_EffectorP.fasta

# Number of proteins with cTP: 9 (15.3%)
# Number of proteins with cTP & possible mTP: 0 (0.0%)
# Number of proteins with cTP & NLS: 2 (3.4%)
# Number of proteins with cTP & possible mTP & NLS: 0 (0.0%)
# Number of proteins with mTP: 1 (1.7%)
# Number of proteins with mTP & possible cTP: 0 (0.0%)
# Number of proteins with mTP & NLS: 2 (3.4%)
# Number of proteins with mTP & possible cTP & NLS: 1 (1.7%)
# Number of proteins with NLS and no transit peptides: 6 (10.2%)
#--------------------------------------
#--------------------------------------
