# -----------------
# LOCALIZER 1.0 Predictions (-e mode) 
# -----------------
Identifier                                                                        	Chloroplast       	Mitochondria      	Nucleus
jgi|Rhoba1_1|54516|estExt_Genemark1.C_90136 | Effector probability: 0.698         	Y (0.999 | 32-61) 	-                 	-      
jgi|Rhoba1_1|52101|estExt_Genemark1.C_3_t10477 | Effector probability: 0.528      	Y (1.0 | 22-53)   	-                 	Y (RKKKGVDGEAEATLAREKR,KKKGVDGEAEATLAREKRA)
jgi|Rhoba1_1|42260|gm1.1825_g | Effector probability: 0.775                       	-                 	-                 	-      
jgi|Rhoba1_1|56490|estExt_Genemark1.C_200063 | Effector probability: 0.567        	-                 	-                 	-      
jgi|Rhoba1_1|55956|estExt_Genemark1.C_160002 | Effector probability: 0.974        	-                 	-                 	-      
jgi|Rhoba1_1|44876|gm1.4441_g | Effector probability: 0.98                        	-                 	-                 	-      
jgi|Rhoba1_1|19038|e_gw1.19.7.1 | Effector probability: 0.974                     	-                 	-                 	Y (KKDQYNIAALCRDPKKADK)
jgi|Rhoba1_1|40950|gm1.515_g | Effector probability: 0.996                        	-                 	-                 	-      
jgi|Rhoba1_1|53896|estExt_Genemark1.C_70385 | Effector probability: 1.0           	-                 	-                 	Y (RHRR)
jgi|Rhoba1_1|39823|estExt_Genewise1Plus.C_170107 | Effector probability: 0.968    	-                 	-                 	Y (PPVKRRS)
jgi|Rhoba1_1|54594|estExt_Genemark1.C_90232 | Effector probability: 0.91          	Y (0.989 | 71-110)	-                 	-      
jgi|Rhoba1_1|1415|gw1.12.36.1 | Effector probability: 0.913                       	-                 	-                 	-      
jgi|Rhoba1_1|46575|gm1.6140_g | Effector probability: 0.551                       	-                 	Y (0.999 | 31-51) 	Y (KKRRRDSGGGGGKRRRVA,GGGGKSSKKRRRDSGGGGGKRRR)
jgi|Rhoba1_1|54632|estExt_Genemark1.C_90280 | Effector probability: 0.809         	Y (0.991 | 31-56) 	Y (0.998 | 25-49) 	Y (RRRVKPAPASDLEAARWRK,RRVKPAPASDLEAARWRKL)
jgi|Rhoba1_1|27913|estExt_Genewise1.C_8_t10386 | Effector probability: 0.716      	-                 	-                 	-      
jgi|Rhoba1_1|52175|estExt_Genemark1.C_3_t20063 | Effector probability: 0.989      	-                 	-                 	-      
jgi|Rhoba1_1|65265|fgenesh1_kg.8_#_116_#_isotig03288 | Effector probability: 0.988	-                 	-                 	-      
jgi|Rhoba1_1|46153|gm1.5718_g | Effector probability: 0.621                       	-                 	-                 	-      
jgi|Rhoba1_1|46983|gm1.6548_g | Effector probability: 0.98                        	Y (0.846 | 41-63) 	-                 	-      
jgi|Rhoba1_1|46842|gm1.6407_g | Effector probability: 0.932                       	-                 	-                 	-      
jgi|Rhoba1_1|42008|gm1.1573_g | Effector probability: 1.0                         	-                 	-                 	-      
jgi|Rhoba1_1|52072|estExt_Genemark1.C_3_t10441 | Effector probability: 0.912      	-                 	-                 	-      
jgi|Rhoba1_1|42247|gm1.1812_g | Effector probability: 0.997                       	-                 	-                 	-      
jgi|Rhoba1_1|65498|fgenesh1_kg.12_#_48_#_isotig15395 | Effector probability: 0.967	-                 	-                 	Y (PDLKRKV)
jgi|Rhoba1_1|42399|gm1.1964_g | Effector probability: 0.996                       	-                 	-                 	-      
jgi|Rhoba1_1|47304|gm1.6869_g | Effector probability: 0.98                        	-                 	-                 	-      
jgi|Rhoba1_1|47442|gm1.7007_g | Effector probability: 0.997                       	Y (0.992 | 38-58) 	Y (0.977 | 46-96) 	-      
jgi|Rhoba1_1|34722|estExt_Genewise1Plus.C_3_t20183 | Effector probability: 0.976  	-                 	-                 	-      
jgi|Rhoba1_1|54543|estExt_Genemark1.C_90165 | Effector probability: 0.999         	-                 	Y (0.892 | 26-59) 	Y (GRGKGKGKGKGKGNNGKG)
jgi|Rhoba1_1|46709|gm1.6274_g | Effector probability: 0.858                       	-                 	-                 	-      
jgi|Rhoba1_1|53248|estExt_Genemark1.C_6_t10150 | Effector probability: 0.81       	-                 	-                 	-      
jgi|Rhoba1_1|53415|estExt_Genemark1.C_6_t10360 | Effector probability: 1.0        	-                 	-                 	Y (KRAQKARELEFEDQARKRA)
jgi|Rhoba1_1|51906|estExt_Genemark1.C_3_t10248 | Effector probability: 0.715      	-                 	Y (0.999 | 104-124)	Y (RVLKRYR,KRSPESREKSAARVKRAKL,RSPESREKSAARVKRAKLAAAKKARRG)
jgi|Rhoba1_1|65786|fgenesh1_kg.20_#_22_#_isotig13048 | Effector probability: 0.994	-                 	-                 	Y (SSRKR)
jgi|Rhoba1_1|66867|estExt_fgenesh1_kg.C_130037 | Effector probability: 0.991      	-                 	-                 	-      
jgi|Rhoba1_1|55257|estExt_Genemark1.C_120074 | Effector probability: 0.785        	-                 	-                 	-      
jgi|Rhoba1_1|54507|estExt_Genemark1.C_90126 | Effector probability: 0.984         	-                 	-                 	-      
jgi|Rhoba1_1|49143|estExt_fgenesh1_pg.C_10075 | Effector probability: 0.999       	-                 	-                 	-      
jgi|Rhoba1_1|40477|gm1.42_g | Effector probability: 0.516                         	-                 	-                 	-      
jgi|Rhoba1_1|14732|e_gw1.6.319.1 | Effector probability: 0.989                    	Y (0.967 | 37-64) 	-                 	-      
jgi|Rhoba1_1|52176|estExt_Genemark1.C_3_t20065 | Effector probability: 0.989      	-                 	-                 	-      
jgi|Rhoba1_1|64618|fgenesh1_kg.3_#_43_#_isotig08292 | Effector probability: 0.979 	-                 	Y (0.992 | 107-135)	Y (KRDLERRAIFARALKRYRC,KESSARVKRAKLAAAKKAKR)
jgi|Rhoba1_1|40456|gm1.21_g | Effector probability: 0.999                         	-                 	-                 	-      
jgi|Rhoba1_1|46297|gm1.5862_g | Effector probability: 0.991                       	-                 	Y (0.998 | 126-146)	Y (RRQGAATASATGKVKGR)
jgi|Rhoba1_1|64440|fgenesh1_kg.1_#_163_#_isotig08004 | Effector probability: 0.983	Y (0.994 | 69-100)	Y (0.997 | 51-86) 	Y (RRAAAAKALKKRAMFKG)
jgi|Rhoba1_1|42454|gm1.2019_g | Effector probability: 0.999                       	-                 	-                 	-      
jgi|Rhoba1_1|38805|estExt_Genewise1Plus.C_120236 | Effector probability: 1.0      	-                 	-                 	Y (RRPPPLLLLLLLRRRHP)
jgi|Rhoba1_1|52059|estExt_Genemark1.C_3_t10425 | Effector probability: 0.566      	-                 	-                 	-      

#--------------------------------------
#--------------------------------------
# Proteins analyzed: 48 from file: ./PaperResults/Rhodotorula_graminis_secretome_EffectorP.fasta

# Number of proteins with cTP: 4 (8.3%)
# Number of proteins with cTP & possible mTP: 0 (0.0%)
# Number of proteins with cTP & NLS: 1 (2.1%)
# Number of proteins with cTP & possible mTP & NLS: 0 (0.0%)
# Number of proteins with mTP: 0 (0.0%)
# Number of proteins with mTP & possible cTP: 1 (2.1%)
# Number of proteins with mTP & NLS: 5 (10.4%)
# Number of proteins with mTP & possible cTP & NLS: 2 (4.2%)
# Number of proteins with NLS and no transit peptides: 7 (14.6%)
#--------------------------------------
#--------------------------------------
