# -----------------
# LOCALIZER 1.0 Predictions (-e mode) 
# -----------------
Identifier                                                                       	Chloroplast       	Mitochondria      	Nucleus
jgi|Fomme1|22397|fgenesh1_kg.9_#_284_#_isotig02935 | Effector probability: 0.99  	-                 	-                 	-      
jgi|Fomme1|169920|estExt_Genemark1.C_9_t10246 | Effector probability: 0.756      	-                 	-                 	-      
jgi|Fomme1|23898|fgenesh1_kg.18_#_30_#_isotig00131 | Effector probability: 0.936 	-                 	-                 	-      
jgi|Fomme1|85591|e_gw1.6.2003.1 | Effector probability: 0.902                    	-                 	-                 	-      
jgi|Fomme1|159826|gm1.10156_g | Effector probability: 0.511                      	-                 	-                 	-      
jgi|Fomme1|18295|fgenesh1_kg.3_#_651_#_isotig05559 | Effector probability: 0.996 	-                 	Y (0.999 | 41-61) 	-      
jgi|Fomme1|156826|gm1.7156_g | Effector probability: 0.989                       	-                 	-                 	-      
jgi|Fomme1|148261|estExt_fgenesh1_pg.C_90156 | Effector probability: 0.994       	-                 	-                 	Y (GKRDAQGPPPPPPPHGKRDAQGPPPPPPPHGKRDAQGPPPPPPPHEKRDAQGPPPPHPPPHGKRDAQGPPPPPPPHGKRDAQGPPPPPPPHGKRDAQGPPPPHPPPHGKRDAQGPP)
jgi|Fomme1|159595|gm1.9925_g | Effector probability: 0.689                       	-                 	-                 	-      
jgi|Fomme1|169557|estExt_Genemark1.C_8_t20295 | Effector probability: 0.986      	-                 	Y (0.979 | 44-73) 	-      
jgi|Fomme1|150820|gm1.1150_g | Effector probability: 0.523                       	-                 	-                 	-      
jgi|Fomme1|156625|gm1.6955_g | Effector probability: 0.967                       	-                 	-                 	-      
jgi|Fomme1|164614|estExt_Genemark1.C_1_t20098 | Effector probability: 1.0        	-                 	-                 	-      
jgi|Fomme1|25027|fgenesh1_pg.1_#_399 | Effector probability: 1.0                 	-                 	-                 	-      
jgi|Fomme1|155063|gm1.5393_g | Effector probability: 0.612                       	Y (0.993 | 24-65) 	Y (0.888 | 50-71) 	-      
jgi|Fomme1|18440|fgenesh1_kg.4_#_5_#_isotig05723 | Effector probability: 0.997   	-                 	-                 	-      
jgi|Fomme1|151116|gm1.1446_g | Effector probability: 0.808                       	Y (0.99 | 36-104) 	-                 	-      
jgi|Fomme1|158963|gm1.9293_g | Effector probability: 0.99                        	-                 	-                 	-      
jgi|Fomme1|148390|estExt_fgenesh1_pg.C_100071 | Effector probability: 0.76       	-                 	-                 	-      
jgi|Fomme1|18630|fgenesh1_kg.4_#_195_#_isotig10822 | Effector probability: 0.941 	-                 	Y (0.992 | 39-66) 	-      
jgi|Fomme1|112184|estExt_Genewise1Plus.C_9_t20357 | Effector probability: 0.938  	Y (0.997 | 27-60) 	-                 	-      
jgi|Fomme1|19380|fgenesh1_kg.5_#_491_#_isotig01920 | Effector probability: 1.0   	-                 	-                 	-      
jgi|Fomme1|152320|gm1.2650_g | Effector probability: 0.554                       	-                 	-                 	-      
jgi|Fomme1|16246|fgenesh1_kg.1_#_341_#_isotig11076 | Effector probability: 0.966 	-                 	-                 	-      
jgi|Fomme1|154738|gm1.5068_g | Effector probability: 0.679                       	-                 	-                 	-      
jgi|Fomme1|74049|e_gw1.1.5211.1 | Effector probability: 0.922                    	-                 	-                 	-      
jgi|Fomme1|29008|fgenesh1_pg.7_#_65 | Effector probability: 0.998                	-                 	-                 	Y (LGEV)
jgi|Fomme1|30628|fgenesh1_pg.9_#_256 | Effector probability: 0.848               	-                 	-                 	-      
jgi|Fomme1|152333|gm1.2663_g | Effector probability: 1.0                         	-                 	-                 	-      
jgi|Fomme1|152251|gm1.2581_g | Effector probability: 0.839                       	-                 	-                 	-      
jgi|Fomme1|141141|estExt_fgenesh1_pm.C_7_t10103 | Effector probability: 0.538    	Y (0.995 | 44-68) 	-                 	-      
jgi|Fomme1|22258|fgenesh1_kg.9_#_145_#_isotig11215 | Effector probability: 0.733 	-                 	-                 	Y (KRRS)
jgi|Fomme1|16409|fgenesh1_kg.1_#_504_#_isotig03782 | Effector probability: 1.0   	-                 	-                 	Y (PKPS)
jgi|Fomme1|112812|estExt_Genewise1Plus.C_11_t10485 | Effector probability: 0.866 	-                 	-                 	-      
jgi|Fomme1|67030|gw1.2.2395.1 | Effector probability: 0.999                      	-                 	-                 	-      
jgi|Fomme1|102591|estExt_Genewise1Plus.C_2_t30063 | Effector probability: 0.917  	-                 	-                 	-      
jgi|Fomme1|151908|gm1.2238_g | Effector probability: 0.966                       	-                 	-                 	Y (LGEV)
jgi|Fomme1|158529|gm1.8859_g | Effector probability: 0.805                       	Y (0.999 | 72-117)	Y (0.995 | 88-114)	-      
jgi|Fomme1|103881|estExt_Genewise1Plus.C_3_t20379 | Effector probability: 0.741  	Y (0.955 | 44-75) 	-                 	Y (KRIR)
jgi|Fomme1|159161|gm1.9491_g | Effector probability: 0.712                       	Y (1.0 | 78-98)   	-                 	-      
jgi|Fomme1|106054|estExt_Genewise1Plus.C_5_t20235 | Effector probability: 0.97   	Y (0.886 | 23-74) 	Y (0.963 | 67-87) 	Y (KRKR)
jgi|Fomme1|88635|e_gw1.8.2214.1 | Effector probability: 0.999                    	-                 	-                 	-      
jgi|Fomme1|141443|estExt_fgenesh1_pm.C_7_t10453 | Effector probability: 0.703    	-                 	-                 	-      
jgi|Fomme1|148242|estExt_fgenesh1_pg.C_90130 | Effector probability: 0.961       	-                 	-                 	-      
jgi|Fomme1|152659|gm1.2989_g | Effector probability: 0.996                       	-                 	-                 	-      
jgi|Fomme1|96717|e_gw1.16.303.1 | Effector probability: 0.802                    	-                 	-                 	-      
jgi|Fomme1|16723|fgenesh1_kg.1_#_818_#_isotig11863 | Effector probability: 0.999 	-                 	-                 	-      
jgi|Fomme1|164549|estExt_Genemark1.C_1_t10489 | Effector probability: 0.925      	-                 	-                 	-      
jgi|Fomme1|156814|gm1.7144_g | Effector probability: 0.793                       	-                 	-                 	-      
jgi|Fomme1|145169|estExt_fgenesh1_pg.C_3_t10324 | Effector probability: 0.59     	-                 	-                 	Y (KKPKSGGNGGYKVKRNRE)
jgi|Fomme1|151998|gm1.2328_g | Effector probability: 0.986                       	-                 	-                 	-      
jgi|Fomme1|25496|fgenesh1_pg.1_#_868 | Effector probability: 0.674               	-                 	-                 	Y (RRTSLKAEDLPLKNGKMKR)
jgi|Fomme1|162710|gm1.13040_g | Effector probability: 0.577                      	-                 	-                 	-      
jgi|Fomme1|159529|gm1.9859_g | Effector probability: 0.725                       	-                 	-                 	-      
jgi|Fomme1|170572|estExt_Genemark1.C_130213 | Effector probability: 0.865        	-                 	-                 	-      
jgi|Fomme1|23667|fgenesh1_kg.16_#_54_#_isotig01067 | Effector probability: 0.703 	-                 	-                 	-      
jgi|Fomme1|162915|gm1.13245_g | Effector probability: 0.774                      	Y (0.984 | 22-60) 	Y (0.992 | 45-67) 	-      
jgi|Fomme1|161377|gm1.11707_g | Effector probability: 0.942                      	-                 	-                 	-      
jgi|Fomme1|159447|gm1.9777_g | Effector probability: 0.856                       	-                 	-                 	Y (LGEV)
jgi|Fomme1|150538|gm1.868_g | Effector probability: 0.927                        	-                 	-                 	-      
jgi|Fomme1|96332|e_gw1.16.531.1 | Effector probability: 0.633                    	-                 	-                 	-      
jgi|Fomme1|88318|e_gw1.8.2162.1 | Effector probability: 0.758                    	-                 	-                 	-      
jgi|Fomme1|24286|fgenesh1_kg.20_#_42_#_isotig05205 | Effector probability: 0.99  	-                 	-                 	-      
jgi|Fomme1|89350|e_gw1.8.2452.1 | Effector probability: 0.99                     	-                 	-                 	-      
jgi|Fomme1|162905|gm1.13235_g | Effector probability: 0.997                      	-                 	-                 	-      
jgi|Fomme1|169860|estExt_Genemark1.C_9_t10117 | Effector probability: 0.921      	-                 	-                 	-      
jgi|Fomme1|123923|estExt_Genewise1.C_7_t10174 | Effector probability: 0.982      	-                 	-                 	-      
jgi|Fomme1|159003|gm1.9333_g | Effector probability: 0.979                       	-                 	-                 	-      
jgi|Fomme1|23189|fgenesh1_kg.13_#_172_#_isotig10918 | Effector probability: 0.583	-                 	-                 	-      
jgi|Fomme1|155180|gm1.5510_g | Effector probability: 1.0                         	-                 	-                 	-      
jgi|Fomme1|142279|estExt_fgenesh1_pm.C_8_t20356 | Effector probability: 0.867    	-                 	-                 	-      
jgi|Fomme1|160551|gm1.10881_g | Effector probability: 0.694                      	-                 	-                 	-      
jgi|Fomme1|139131|estExt_fgenesh1_pm.C_3_t10363 | Effector probability: 0.914    	-                 	-                 	-      
jgi|Fomme1|138029|estExt_fgenesh1_pm.C_1_t10487 | Effector probability: 0.712    	-                 	-                 	-      
jgi|Fomme1|20101|fgenesh1_kg.6_#_233_#_isotig05327 | Effector probability: 0.968 	-                 	-                 	-      
jgi|Fomme1|159043|gm1.9373_g | Effector probability: 1.0                         	-                 	-                 	-      
jgi|Fomme1|150942|gm1.1272_g | Effector probability: 0.583                       	-                 	-                 	-      
jgi|Fomme1|151783|gm1.2113_g | Effector probability: 0.998                       	-                 	-                 	-      
jgi|Fomme1|142306|estExt_fgenesh1_pm.C_90025 | Effector probability: 0.701       	Y (0.767 | 24-72) 	-                 	-      
jgi|Fomme1|93872|e_gw1.12.264.1 | Effector probability: 0.681                    	-                 	-                 	-      
jgi|Fomme1|159594|gm1.9924_g | Effector probability: 0.912                       	-                 	-                 	-      
jgi|Fomme1|92733|e_gw1.10.17.1 | Effector probability: 1.0                       	-                 	-                 	-      
jgi|Fomme1|20269|fgenesh1_kg.6_#_401_#_isotig12713 | Effector probability: 0.77  	-                 	-                 	-      
jgi|Fomme1|97934|e_gw1.18.301.1 | Effector probability: 0.903                    	-                 	-                 	-      
jgi|Fomme1|159524|gm1.9854_g | Effector probability: 0.972                       	-                 	-                 	-      
jgi|Fomme1|136659|fgenesh1_pm.13_#_149 | Effector probability: 0.881             	-                 	Y (0.986 | 48-69) 	-      
jgi|Fomme1|22191|fgenesh1_kg.9_#_78_#_isotig11791 | Effector probability: 0.793  	-                 	-                 	-      
jgi|Fomme1|74231|e_gw1.1.1205.1 | Effector probability: 0.533                    	-                 	-                 	-      
jgi|Fomme1|150266|gm1.596_g | Effector probability: 0.501                        	-                 	-                 	-      
jgi|Fomme1|159143|gm1.9473_g | Effector probability: 0.663                       	-                 	-                 	-      
jgi|Fomme1|164182|gm1.14512_g | Effector probability: 0.924                      	-                 	-                 	-      
jgi|Fomme1|151487|gm1.1817_g | Effector probability: 0.905                       	Y (0.995 | 21-60) 	Y (0.998 | 48-68) 	-      
jgi|Fomme1|26929|fgenesh1_pg.3_#_666 | Effector probability: 0.965               	-                 	-                 	-      
jgi|Fomme1|161376|gm1.11706_g | Effector probability: 0.927                      	-                 	-                 	-      
jgi|Fomme1|105726|estExt_Genewise1Plus.C_5_t10329 | Effector probability: 0.785  	-                 	Y (0.975 | 55-75) 	-      
jgi|Fomme1|150794|gm1.1124_g | Effector probability: 0.997                       	-                 	-                 	-      
jgi|Fomme1|150528|gm1.858_g | Effector probability: 0.895                        	-                 	-                 	-      
jgi|Fomme1|149952|gm1.282_g | Effector probability: 0.574                        	Y (0.989 | 24-64) 	Y (0.944 | 23-44) 	-      
jgi|Fomme1|156650|gm1.6980_g | Effector probability: 0.892                       	-                 	-                 	-      
jgi|Fomme1|151269|gm1.1599_g | Effector probability: 0.963                       	-                 	-                 	-      
jgi|Fomme1|166497|estExt_Genemark1.C_3_t30108 | Effector probability: 0.944      	Y (0.857 | 28-102)	-                 	-      
jgi|Fomme1|123200|estExt_Genewise1.C_6_t30137 | Effector probability: 0.957      	-                 	-                 	-      
jgi|Fomme1|158873|gm1.9203_g | Effector probability: 0.721                       	-                 	-                 	-      
jgi|Fomme1|21507|fgenesh1_kg.8_#_273_#_isotig12275 | Effector probability: 0.872 	-                 	-                 	-      
jgi|Fomme1|148194|estExt_fgenesh1_pg.C_90064 | Effector probability: 0.959       	-                 	-                 	Y (PKPS)
jgi|Fomme1|158797|gm1.9127_g | Effector probability: 0.937                       	-                 	-                 	-      
jgi|Fomme1|156827|gm1.7157_g | Effector probability: 0.958                       	-                 	-                 	-      
jgi|Fomme1|152951|gm1.3281_g | Effector probability: 1.0                         	-                 	-                 	-      
jgi|Fomme1|25170|fgenesh1_pg.1_#_542 | Effector probability: 0.879               	-                 	-                 	-      
jgi|Fomme1|21948|fgenesh1_kg.8_#_714_#_isotig08909 | Effector probability: 0.933 	-                 	-                 	-      
jgi|Fomme1|126990|estExt_Genewise1.C_9_t10099 | Effector probability: 0.892      	-                 	-                 	-      
jgi|Fomme1|152247|gm1.2577_g | Effector probability: 0.98                        	-                 	-                 	Y (KRDK)
jgi|Fomme1|17604|fgenesh1_kg.2_#_686_#_isotig05606 | Effector probability: 0.965 	-                 	-                 	-      
jgi|Fomme1|31958|fgenesh1_pg.17_#_16 | Effector probability: 0.999               	Y (0.945 | 65-94) 	-                 	-      
jgi|Fomme1|163219|gm1.13549_g | Effector probability: 0.988                      	-                 	-                 	-      
jgi|Fomme1|22212|fgenesh1_kg.9_#_99_#_isotig00163 | Effector probability: 0.995  	-                 	-                 	-      
jgi|Fomme1|28902|fgenesh1_pg.6_#_603 | Effector probability: 0.998               	-                 	-                 	-      
jgi|Fomme1|168300|estExt_Genemark1.C_6_t20347 | Effector probability: 0.982      	-                 	-                 	-      
jgi|Fomme1|17605|fgenesh1_kg.2_#_687_#_isotig11152 | Effector probability: 0.644 	-                 	-                 	-      
jgi|Fomme1|24806|fgenesh1_pg.1_#_178 | Effector probability: 0.998               	-                 	-                 	-      
jgi|Fomme1|157975|gm1.8305_g | Effector probability: 0.961                       	-                 	-                 	-      
jgi|Fomme1|149801|gm1.131_g | Effector probability: 0.616                        	-                 	-                 	-      
jgi|Fomme1|99170|e_gw1.348.1.1 | Effector probability: 0.93                      	-                 	-                 	-      
jgi|Fomme1|114506|estExt_Genewise1Plus.C_170349 | Effector probability: 0.756    	-                 	-                 	-      
jgi|Fomme1|133372|fgenesh1_pm.5_#_420 | Effector probability: 0.91               	-                 	Y (0.893 | 59-96) 	-      
jgi|Fomme1|25140|fgenesh1_pg.1_#_512 | Effector probability: 0.964               	-                 	-                 	-      
jgi|Fomme1|156976|gm1.7306_g | Effector probability: 1.0                         	-                 	-                 	-      
jgi|Fomme1|27063|fgenesh1_pg.4_#_60 | Effector probability: 0.943                	-                 	-                 	-      
jgi|Fomme1|135928|fgenesh1_pm.9_#_23 | Effector probability: 0.976               	-                 	-                 	-      
jgi|Fomme1|148236|estExt_fgenesh1_pg.C_90119 | Effector probability: 0.901       	-                 	-                 	-      
jgi|Fomme1|156844|gm1.7174_g | Effector probability: 0.75                        	-                 	-                 	Y (QKKK,KKRSSTGGSKEKRKST,KKKSFQVQRQSGTSEKKRS,KKSFQVQRQSGTSEKKRSS)
jgi|Fomme1|168177|estExt_Genemark1.C_6_t20163 | Effector probability: 0.697      	Y (1.0 | 65-115)  	Y (0.984 | 74-98) 	-      
jgi|Fomme1|146792|estExt_fgenesh1_pg.C_6_t10378 | Effector probability: 0.871    	-                 	-                 	-      
jgi|Fomme1|137589|fgenesh1_pm.90_#_1 | Effector probability: 0.972               	-                 	-                 	-      
jgi|Fomme1|162435|gm1.12765_g | Effector probability: 0.991                      	-                 	-                 	-      
jgi|Fomme1|154024|gm1.4354_g | Effector probability: 0.972                       	-                 	-                 	-      
jgi|Fomme1|21668|fgenesh1_kg.8_#_434_#_isotig10203 | Effector probability: 0.77  	-                 	-                 	-      
jgi|Fomme1|135929|fgenesh1_pm.9_#_24 | Effector probability: 0.88                	Y (0.788 | 22-72) 	-                 	-      
jgi|Fomme1|156243|gm1.6573_g | Effector probability: 0.97                        	-                 	-                 	-      
jgi|Fomme1|111922|estExt_Genewise1Plus.C_9_t10189 | Effector probability: 0.959  	-                 	-                 	-      
jgi|Fomme1|158948|gm1.9278_g | Effector probability: 0.665                       	-                 	-                 	Y (RRISDRLSGVFRRRDRQR)
jgi|Fomme1|94089|e_gw1.12.282.1 | Effector probability: 0.95                     	-                 	-                 	-      

#--------------------------------------
#--------------------------------------
# Proteins analyzed: 142 from file: ./PaperResults/Fomitiporia_mediterranea_secretome_EffectorP.fasta

# Number of proteins with cTP: 8 (5.6%)
# Number of proteins with cTP & possible mTP: 6 (4.2%)
# Number of proteins with cTP & NLS: 1 (0.7%)
# Number of proteins with cTP & possible mTP & NLS: 1 (0.7%)
# Number of proteins with mTP: 6 (4.2%)
# Number of proteins with mTP & possible cTP: 0 (0.0%)
# Number of proteins with mTP & NLS: 0 (0.0%)
# Number of proteins with mTP & possible cTP & NLS: 0 (0.0%)
# Number of proteins with NLS and no transit peptides: 12 (8.5%)
#--------------------------------------
#--------------------------------------
